CDS

Accession Number TCMCG051C24346
gbkey CDS
Protein Id XP_006379409.2
Location join(555194..555288,555392..555542,555886..556175,556261..556357,556577..556682,556776..556858,557012..557047,557050..557159,557440..557545,557843..557902,558093..558113)
Gene LOC18101274
GeneID 18101274
Organism Populus trichocarpa

Protein

Length 384aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_006379347.2
Definition LOW QUALITY PROTEIN: tyrosine--tRNA ligase 1, cytoplasmic [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category J
Description Belongs to the class-I aminoacyl-tRNA synthetase family
KEGG_TC -
KEGG_Module M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R02918        [VIEW IN KEGG]
KEGG_rclass RC00055        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K01866        [VIEW IN KEGG]
EC 6.1.1.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00970        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004812        [VIEW IN EMBL-EBI]
GO:0004831        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006418        [VIEW IN EMBL-EBI]
GO:0006437        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016597        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016875        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0031406        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0043038        [VIEW IN EMBL-EBI]
GO:0043039        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043177        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072545        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAGAGAATGACCGAACCCCTCCATCTGAAGAGATGCAACCCCTCTCTGTCACCCCTTCAGCTTCACCCTCATCAAATCCCTCTACACCCCAGGTGATGAGTTTAGAGGAAAGGTTTCAACTTGTGAGAAGTGTTGGTGAAGAATGCATCCAAGAAGATGAACTACGTAATCTTCTTGATAAAAAACCGCTACCCATTTGTTATGATGGTTTTGAACCTTCTGGGAGAATGCACATTGCTCAGGGAGTTATGAAGACAATAAATGTCAACAAGCTGACTAAAGCTGGTTGCAAAGTGAAAATTTGGATTGCTGACTGGTTTGCGCAACTAAATAACAAAATGGGAGGAGACTTGAAGAAAATTAAAACAGTGGGAGAATATCTTATTGAGATATGGAAGGCAGTTGGGATGGATATTGATGGAGATAAAGTCGAGTTTTTGTGGTCTTCCGACGAAATCAACTCCAGGGCTCATGAATACTGGCCTCTTGTTATGGATATAGCTCGCAGGAACAAGCTTCCTAGGATAATGAGATGTGTTCAAATCATGGGCCGTAGTGAGCAGGATGAGCTAACGGCAGCCCAGATTTTCTACCCATGCATGCAATGTGCAGACATATTTTTCCTCAAGGCTGACATTTGTCAATTGGGGATGGATCAACGGAAAGTGAACGTCCTTGCAAGAGAATACTGTGATGACATAAAGAGGAAAAACAAGCCTATCATTTTATCTCATCACATGCTACCTGGTTTACAGCAAGGGCAAGAAAAGATGTCAAAAAGTGATCCATCTTCCTCCATCTTCATGGAGGATGAAGAGGCAGAGGTGAAAACTAAGATAAAGAAGGCATATTGCCCCCCCCAAATTGCCGAGGGCAATCCTTGTCTGGAATACATTAAATACATTATCTTCCCATGGTTCCATGAGTTCAAGGTGGAAAGCAATCCAGAAAATGGTGGAGAGAAGGTCTACAAAAGCTTTGAAGAACTGGTAGCTGACTATGAAAGTGGTGGATTACATCCGGGTGACCTGAAACCAGCTCTTGCGAAAGCGTTGAATACAATACCGCAGCCTGTACGCGATCATTTTAGCAAAGATCCCAAGGCTAAAGATCTGTTGAAACGAGTCAAGGGTTACAGAGTAACAAGGTGA
Protein:  
MEENDRTPPSEEMQPLSVTPSASPSSNPSTPQVMSLEERFQLVRSVGEECIQEDELRNLLDKKPLPICYDGFEPSGRMHIAQGVMKTINVNKLTKAGCKVKIWIADWFAQLNNKMGGDLKKIKTVGEYLIEIWKAVGMDIDGDKVEFLWSSDEINSRAHEYWPLVMDIARRNKLPRIMRCVQIMGRSEQDELTAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSSIFMEDEEAEVKTKIKKAYCPPQIAEGNPCLEYIKYIIFPWFHEFKVESNPENGGEKVYKSFEELVADYESGGLHPGDLKPALAKALNTIPQPVRDHFSKDPKAKDLLKRVKGYRVTR